PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C013578P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family G2-like
Protein Properties Length: 119aa    MW: 13318.8 Da    PI: 9.6884
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C013578P1genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like1031.8e-3252105255
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     prlrWtp+LH +Fv+ave+LGG+e+AtPk +l+lm+v gL+++hvkSHLQ+YR+
  MELO3C013578P1  52 PRLRWTPDLHLAFVNAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRS 105
                     8****************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.29748108IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.5E-3048106IPR009057Homeodomain-like
SuperFamilySSF466895.02E-1550106IPR009057Homeodomain-like
TIGRFAMsTIGR015574.0E-2452107IPR006447Myb domain, plants
PfamPF002496.8E-1053104IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    Send to blast
MDEGFGEGNS NNSNTSSNNG SMEEVEKEEE FDEQRSRSGH GSVRKYSRSK MPRLRWTPDL  60
HLAFVNAVER LGGQERATPK LVLQLMNVRG LSIAHVKSHL QMYRSKKLDE SGQGRVSI*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6819181e-123LN681918.1 Cucumis melo genomic scaffold, anchoredscaffold00020.
GenBankLN7132651e-123LN713265.1 Cucumis melo genomic chromosome, chr_11.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008448244.13e-75PREDICTED: uncharacterized protein LOC103490495 isoform X1
RefseqXP_008448245.13e-75PREDICTED: uncharacterized protein LOC103490495 isoform X1
RefseqXP_008448246.16e-78PREDICTED: probable transcription factor KAN2 isoform X2
SwissprotQ700D93e-29MYBF_ARATH; Putative Myb family transcription factor At1g14600
TrEMBLA0A0A0KBB23e-52A0A0A0KBB2_CUCSA; Uncharacterized protein
STRINGVIT_12s0028g02080.t012e-44(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF30123270
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.12e-38G2-like family protein